PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g260070.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 727aa MW: 80454 Da PI: 7.7223

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g260070.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	1.9e-10	36	87	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 +W t+E++ll++av+++G+ +W+++a ++ +t+ ck ++++++ Pd.00g260070.m02 36 SWGTWEELLLACAVHRFGTQSWDAVATELSkrssnlHLLTPHACKRKFHDLR 87 7*****************************9999997799999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MNVESVVAEG SCDNGLSDYM IFLMDKPNFP EKQTPSWGTW EELLLACAVH RFGTQSWDAV 60 ATELSKRSSN LHLLTPHACK RKFHDLRRRF SQNDSASGKD DDTPPTPWLD QLRQRRLDEL 120 RRELQRYDHS IVSLQLKVER LTEVREQSLR ETEKPVEKSD LEKTGEEEIE HKDAEPEDSS 180 PEKKGSSGEV SEHDDRSCNE SNTTDPKHEI PETEVADADK GSGQTEPAGE EIEPVEKLDN 240 PVVEDSCNGS SDSVVKETAV VEAEKGNSGE LKESVAESKG REEEEGTKVS PSNSEVQSSA 300 SLSRKLGQEP KPGGPGGPDR PEEPSEPDQE DESPAMKGVP VESQPLVEFL GILRSHKFAS 360 FFERRLHSQV GGRCPIRINN NVIHGSLILQ ETPIFKNMIR QHVDFELVQT RLEGGRYEPC 420 SRFLFFRDLL LICNNAIVFF GKKSPEYKAA CELQLLVSKD MVLQAPKQDP PPKEETPKLP 480 APPLNQDPET SDSLLAKSKL SLPLNACRKR SSITARASTT SSSGPDRKKE QITTSFSDVK 540 PAVSWKQKEE SSDEVEKLHV TKKRRKERLR SSSRNNSSKN GRSRCNTNND RNSEANDGFS 600 SRVVTSNENS ESKAETEKKS NTNSSGKKRS AADFLSRMKR SSTSKTGLSA ETSKTPDNNS 660 KGGRAEQRKN GNGKGNAQKD QGSRRGSGGR QAAKEQGSPT KRSVGRPSKR AAAPATAGPA 720 KRTRQRG

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MNVESVVAEG SCDNGLSDYM IFLMDKPNFP EKQTPSWGTW EELLLACAVH RFGTQSWDAV  60
ATELSKRSSN LHLLTPHACK RKFHDLRRRF SQNDSASGKD DDTPPTPWLD QLRQRRLDEL  120
RRELQRYDHS IVSLQLKVER LTEVREQSLR ETEKPVEKSD LEKTGEEEIE HKDAEPEDSS  180
PEKKGSSGEV SEHDDRSCNE SNTTDPKHEI PETEVADADK GSGQTEPAGE EIEPVEKLDN  240
PVVEDSCNGS SDSVVKETAV VEAEKGNSGE LKESVAESKG REEEEGTKVS PSNSEVQSSA  300
SLSRKLGQEP KPGGPGGPDR PEEPSEPDQE DESPAMKGVP VESQPLVEFL GILRSHKFAS  360
FFERRLHSQV GGRCPIRINN NVIHGSLILQ ETPIFKNMIR QHVDFELVQT RLEGGRYEPC  420
SRFLFFRDLL LICNNAIVFF GKKSPEYKAA CELQLLVSKD MVLQAPKQDP PPKEETPKLP  480
APPLNQDPET SDSLLAKSKL SLPLNACRKR SSITARASTT SSSGPDRKKE QITTSFSDVK  540
PAVSWKQKEE SSDEVEKLHV TKKRRKERLR SSSRNNSSKN GRSRCNTNND RNSEANDGFS  600
SRVVTSNENS ESKAETEKKS NTNSSGKKRS AADFLSRMKR SSTSKTGLSA ETSKTPDNNS  660
KGGRAEQRKN GNGKGNAQKD QGSRRGSGGR QAAKEQGSPT KRSVGRPSKR AAAPATAGPA  720
KRTRQRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	562	566	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	4e-68	MYB_related family protein