PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g257520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 341aa    MW: 38434.9 Da    PI: 5.8035
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g257520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.8e-17218323198
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkld 85 
                       f+k+ltpsdv+k+ rl+l k+++e+h       g++++e++++t +d +g+++ +k++ ++++  yvl+kGWk F+++ gL  + Df+++ + 
  Pd.00g257520.m01 218 FEKQLTPSDVSKTPRLRLNKEYVENHikpvlrnGENPNEGIDVTTYDMEGNEYPMKFTTWGTD-LYVLSKGWKTFCHDLGLVeTQDFLTLWVF 309
                       99*******************************9999********************878775.7***************98799***98765 PP

                       SS.SEE..EEEEE- CS
                B3  86 gr.sefelvvkvfr 98 
                       ++ +++ l++ +++
  Pd.00g257520.m01 310 HHaKNRGLCFAIHS 323
                       55566666776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MADDHNDDPP NEFTAAFSNS ESSNDELEGN NEPAENAQEE LAAATLQCTE VEATGAQEPA  60
VASLQRSTVF QEPAVASLQR STRFQESAVM AAHDMPDQPQ DREDPGYENK EMADSIKGAH  120
DLLYLKHSIL DYKTARKLEH MKSKILSGIG LNSPSGSKQK VLRIQESEAT NGAAQGRREL  180
QFQQEEGGGG LFYGHYAPPD LPPITSLRKL IRDCCKPFEK QLTPSDVSKT PRLRLNKEYV  240
ENHIKPVLRN GENPNEGIDV TTYDMEGNEY PMKFTTWGTD LYVLSKGWKT FCHDLGLVET  300
QDFLTLWVFH HAKNRGLCFA IHSRRLPVFE TIKKRRQRKQ N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.14e-27B3 family protein