PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g255580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 456aa MW: 51041.6 Da PI: 6.9683

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g255580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.6	3.4e-14	197	244	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r +WT++Ede+l ++++ +G+g W+ +++ g++R++k+c+ rw +yl Pd.00g255580.m01 197 RRAWTAQEDEILSHYINTYGKGKWSDLPQRAGLKRSGKSCRMRWVNYL 244 679*******************************************97 PP
2	Myb_DNA-binding	51.4	2.5e-16	250	295	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g255580.m01 250 RGNISADEEDLIVRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 295 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MVNGLNGLAS LNLTLHLTAG PLYRTRSSPI AFTHLLHSRY STKDDLSTYT VHPNHLSVVK 60 DSVLPICDDV MAVDWVAEDV QGPVAPPPGS AIRVSFLKLK ENLGEESKSE ILGVIKGIKG 120 KFAEINQIST GENFSPARAK GYSIASLAVL PGVSELEGLD SKQELANAEK DKVREHLESV 180 IVLDYVVASP QSARINRRAW TAQEDEILSH YINTYGKGKW SDLPQRAGLK RSGKSCRMRW 240 VNYLRPGIKR GNISADEEDL IVRLHKLLGN RWSLIAGRIP GRTDNEIKNY WNTHLSRRSS 300 PDQELLEHHK PSVNPKNQHN EKGLIPSDQS HKAKAIRPKH FKCTKVDVGI PSHLQDDQDH 360 QIMVDTTNNI NSFSSSSVPA GSSSNDLFIL DLLNSTEIQQ AQMKEWQWQV AMVENYWRDS 420 PIIAAVDPFE PNIDGEVAFN ALSSFMNIED YQYWIN

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MVNGLNGLAS LNLTLHLTAG PLYRTRSSPI AFTHLLHSRY STKDDLSTYT VHPNHLSVVK  60
DSVLPICDDV MAVDWVAEDV QGPVAPPPGS AIRVSFLKLK ENLGEESKSE ILGVIKGIKG  120
KFAEINQIST GENFSPARAK GYSIASLAVL PGVSELEGLD SKQELANAEK DKVREHLESV  180
IVLDYVVASP QSARINRRAW TAQEDEILSH YINTYGKGKW SDLPQRAGLK RSGKSCRMRW  240
VNYLRPGIKR GNISADEEDL IVRLHKLLGN RWSLIAGRIP GRTDNEIKNY WNTHLSRRSS  300
PDQELLEHHK PSVNPKNQHN EKGLIPSDQS HKAKAIRPKH FKCTKVDVGI PSHLQDDQDH  360
QIMVDTTNNI NSFSSSSVPA GSSSNDLFIL DLLNSTEIQQ AQMKEWQWQV AMVENYWRDS  420
PIIAAVDPFE PNIDGEVAFN ALSSFMNIED YQYWIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-53	MYB family protein