PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g250460.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 897aa MW: 97718 Da PI: 4.7063 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.7 | 1.5e-09 | 762 | 810 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pd.00g250460.m02 762 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 810 69*********************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 897 aa Download sequence |
MDSDVDVSRW VLELLIRDRE TECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT 60 ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LAGLMGKPSG KYLEAVDRIW 120 RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA 180 LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQIKNG ANRSELEAQT 240 ENGANAGDGS ELEAQMANAA DVGGESELEA QMENGANVGG ESELEAQMEN GDNVLMASGT 300 NAVDGSELEK EVVNETNAGD GSQLEVQTTN GTNAAGESVL EAQLVNGTNL GDGCELQVQR 360 VNEANGSCGF ESGPQPMTGV QLREGGASRM PPTMSRDLVL NEMDSGFTNR DVLRFGDDQV 420 HETGVGLPST NRELVFSLDP TTKDKEIQRS TGLRYKHLAH RRTRGPVRIR DAEDLGRDLS 480 NSKYDSLSTP EVSNAQEALR SSILELQAVV TDPLPDALRV AETIRLDLAM KSVNVGAENL 540 SVEKGAGPVL SHNDNLGNMS VPQSSGKEKD VPTPPVNQGK GTESVQTDDA NLGNPSSSNK 600 NNAPRPMTDP LPDALQVAET IRLDLAMKSV NVGAENLSVE IGARPVQSHN DNLGNVSIPQ 660 SSGKEKDVPN PPVNQGKGTE SVQTDDVNLG NPSSSNKNNA PRPSLMERNT TAHTYEWDDS 720 IDTSQGAMKD PGRLRLPSPK RNAVSPLKKY ENKRFTKRRK AKRWSLLEED TLRTGVQKYG 780 AGNWKFILNS YREIFEERTE VDLKDKWRNM TRKRGKDSLK DSSYGQVCSL WGGIHRIKGL 840 HDAQNTAEDR RTTCSCIQQG AAMIPGIDYD RINTLGDRCG SPCPYKVYPS TNCSELS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06910.1 | 1e-18 | MYB_related family protein |