PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g250460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 898aa MW: 97775 Da PI: 4.7063

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g250460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	762	810	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pd.00g250460.m01 762 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 810 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MDSDVDVSRW VLELLIRDRE TECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT 60 ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LAGLMGKPSG KYLEAVDRIW 120 RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA 180 LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQIKNG ANRSELEAQT 240 ENGANAGDGS ELEAQMANAA DVGGESELEA QMENGANVGG ESELEAQMEN GDNVLMASGT 300 NAVDGSELEK EVVNETNAGD GSQLEVQTTN GTNAAGESVL EAQLVNGTNL GDGCELQVQR 360 VNEANGSCGF ESGPQPMTGV QLREGGASRM PPTMSRDLVL NEMDSGFTNR DVLRFGDDQV 420 HETGVGLPST NRELVFSLDP TTKDKEIQRS TGLRYKHLAH RRTRGPVRIR DAEDLGRDLS 480 NSKYDSLSTP EVSNAQEALR SSILELQAVV TDPLPDALRV AETIRLDLAM KSVNVGAENL 540 SVEKGAGPVL SHNDNLGNMS VPQSSGKEKD VPTPPVNQGK GTESVQTDDA NLGNPSSSNK 600 NNAPRPMTDP LPDALQVAET IRLDLAMKSV NVGAENLSVE IGARPVQSHN DNLGNVSIPQ 660 SSGKEKDVPN PPVNQGKGTE SVQTDDVNLG NPSSSNKNNA PRPSLMERNT TAHTYEWDDS 720 IDTSQGAMKD PGRLRLPSPK RNAVSPLKKY ENKRFTKRRK AKRWSLLEED TLRTGVQKYG 780 AGNWKFILNS YREIFEERTE VDLKDKWRNM TRKRGKDSLK DSSYGQVCSL WGGIHRGIKG 840 LHDAQNTAED RRTTCSCIQQ GAAMIPGIDY DRINTLGDRC GSPCPYKVYP STNCSELS

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MDSDVDVSRW VLELLIRDRE TECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT  60
ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LAGLMGKPSG KYLEAVDRIW  120
RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA  180
LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQIKNG ANRSELEAQT  240
ENGANAGDGS ELEAQMANAA DVGGESELEA QMENGANVGG ESELEAQMEN GDNVLMASGT  300
NAVDGSELEK EVVNETNAGD GSQLEVQTTN GTNAAGESVL EAQLVNGTNL GDGCELQVQR  360
VNEANGSCGF ESGPQPMTGV QLREGGASRM PPTMSRDLVL NEMDSGFTNR DVLRFGDDQV  420
HETGVGLPST NRELVFSLDP TTKDKEIQRS TGLRYKHLAH RRTRGPVRIR DAEDLGRDLS  480
NSKYDSLSTP EVSNAQEALR SSILELQAVV TDPLPDALRV AETIRLDLAM KSVNVGAENL  540
SVEKGAGPVL SHNDNLGNMS VPQSSGKEKD VPTPPVNQGK GTESVQTDDA NLGNPSSSNK  600
NNAPRPMTDP LPDALQVAET IRLDLAMKSV NVGAENLSVE IGARPVQSHN DNLGNVSIPQ  660
SSGKEKDVPN PPVNQGKGTE SVQTDDVNLG NPSSSNKNNA PRPSLMERNT TAHTYEWDDS  720
IDTSQGAMKD PGRLRLPSPK RNAVSPLKKY ENKRFTKRRK AKRWSLLEED TLRTGVQKYG  780
AGNWKFILNS YREIFEERTE VDLKDKWRNM TRKRGKDSLK DSSYGQVCSL WGGIHRGIKG  840
LHDAQNTAED RRTTCSCIQQ GAAMIPGIDY DRINTLGDRC GSPCPYKVYP STNCSELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	1e-18	MYB_related family protein