PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g249570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 380aa    MW: 41315.7 Da    PI: 5.3828
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g249570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-081291652046
                       TTT...........-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  20 Ggg...........tWktIartmgkgRtlkqcksrwqk 46 
                       G+            +W+ Ia+ ++ gRt++++k++w++
  Pd.00g249570.m01 129 GTCiaytitaassvRWSIIAAQLP-GRTDNDVKNHWNT 165
                       444666666667778*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MVGGGEAEED EQLPLLISSS STKKLSQQPL KRTGTIWTAV AHIITGVIGA GVLSLAWSVA  60
QLGWLAGPLF MLVFAAVTML SNNLLCDCYR YPDSDGPTRS RSYMEAVKIY LGEKWQIVSA  120
IFIHESLYGT CIAYTITAAS SVRWSIIAAQ LPGRTDNDVK NHWNTKLKKK LSGMGIDPVT  180
HKPFSHLMAE IATTLAPPQV AHLAEAALGC FKDEMLHLLT KRRIDFQFQH SNATPGNSTA  240
TYINSKQEEK DDTIEKIKIG LSRAMQEPDM LTSNKPWDPT GATSANFTGN CSAFPLPMSG  300
FQYGPSTFGN EGDGSPWSQS MCTGSTCTGA DQQGQLHDKL GEQNGEESEG GKELRNGSNI  360
FNSDSILWDL PSDDLMNPMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-53MYB family protein