PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g241750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Dof | ||||||||
Protein Properties | Length: 255aa MW: 26968.2 Da PI: 8.0686 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 72.7 | 5.2e-23 | 9 | 45 | 25 | 61 |
zf-Dof 25 slsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 slsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+ Pd.00g241750.m01 9 SLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRP 45 799******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDQQNPDQSL SQPRYFCKTC RRYWTQGGTL RNVPVGGGCR KGKRPKTNSS SSSSSPSLQP 60 QAQAQAPQED QQTVKNLSTT SPSSNLGAIE STGNLASHHQ YYPGGIGYLS SYAAIQSLNQ 120 SQPFNVGGHE QLGGGASSNM SLLQGFNVSA PFGQFYQAGN TKSSMVDQTA LYPSDQEGLL 180 IQPTRPSAAS DHDWPHQSFN INRSSANASS AASESALWAT STSGNMNTSS TTTSAGPSLN 240 PNQWPDLPGS YGPPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 3e-19 | Dof family protein |