PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g231620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 1066aa MW: 117695 Da PI: 5.2569

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g231620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.5	2.6e-55	921	1014	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yr Pd.00g231620.m01 921 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRYR 1011 59***************************************************************************************** PP NF-YB 92 ele 94 e + Pd.00g231620.m01 1012 EGD 1014 966 PP

Sequence ? help Back to Top
Protein Sequence Length: 1066 aa Download sequence
MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDDLG LEWTPDELNY GEISLISVAN 60 DTRKQYSTLR HFPADSRKYC YTMNVTSRTR YLLRATFLYG NFDNNNVYPK FDISLGATHW 120 STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF 180 YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR 240 DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN 300 PEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE 360 KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT 420 GDIPSDLTKL SNLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL 480 KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGS RVNIIIGTSV GAAVLVIVTI 540 VSCVLLRKGK KKYYDQDHQL GRPLPRQGLL STKSDSAPTE AAHCFSYSEI EEATRNFEKK 600 IGSGGFGVVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE 660 DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKGIEYLH TGLDGASHVS 720 SIVRGTVGYL DPEYYISQQL TDKSDVYSFG VILLELISGQ EAISNENFGV NCRNIVQWAK 780 LHIESGDIQG IIDPSLHGEY DIQSMWKIAE KALMCVQAHG FMRPSISEVL KEIQDAISME 840 RDAGAARDGT SDASRNSIPS SLNLGSMDLG GTDNFLSIDE SIARPTARPL NINRVSMAEA 900 PGSPGGGSHE SGGDQSPRSN VREQDRYLPI ANISRIMKKA LPANGKIAKD AKETVQECVS 960 EFISFITSEA SDKCQREKRK TINGDDLLWA MATLGFEDYI DPLKVYLTRY REGDTKGSGK 1020 GGDSSSKKDA QPSSNAQISR QGSFSQGGNY SNSQSQHMMV PMQGTE

Sequence ? help Back to Top

Protein Sequence Length: 1066 aa Download sequence

MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDDLG LEWTPDELNY GEISLISVAN  60
DTRKQYSTLR HFPADSRKYC YTMNVTSRTR YLLRATFLYG NFDNNNVYPK FDISLGATHW  120
STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF  180
YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR  240
DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN  300
PEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE  360
KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT  420
GDIPSDLTKL SNLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL  480
KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGS RVNIIIGTSV GAAVLVIVTI  540
VSCVLLRKGK KKYYDQDHQL GRPLPRQGLL STKSDSAPTE AAHCFSYSEI EEATRNFEKK  600
IGSGGFGVVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE  660
DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKGIEYLH TGLDGASHVS  720
SIVRGTVGYL DPEYYISQQL TDKSDVYSFG VILLELISGQ EAISNENFGV NCRNIVQWAK  780
LHIESGDIQG IIDPSLHGEY DIQSMWKIAE KALMCVQAHG FMRPSISEVL KEIQDAISME  840
RDAGAARDGT SDASRNSIPS SLNLGSMDLG GTDNFLSIDE SIARPTARPL NINRVSMAEA  900
PGSPGGGSHE SGGDQSPRSN VREQDRYLPI ANISRIMKKA LPANGKIAKD AKETVQECVS  960
EFISFITSEA SDKCQREKRK TINGDDLLWA MATLGFEDYI DPLKVYLTRY REGDTKGSGK  1020
GGDSSSKKDA QPSSNAQISR QGSFSQGGNY SNSQSQHMMV PMQGTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	3e-62	NF-YB family protein