PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g224810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1031aa MW: 115541 Da PI: 4.8284

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g224810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.7e-07	969	1022	1	46
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqk 46 + +WT eE+e l+++v+ + Wk I + g Rt+ ++k++w++ Pd.00g224810.m01 969 KVPWTVEEEEMLKKGVETVSRNegniPWKQILEFGGsvflHSRTPIDLKDKWRN 1022 579**************999*****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MDGMNEQERA IAWLWAIEAL ASFREVDVSL LHDLVEMAPA LPDDMGKNAK ERVALRCLEG 60 LLGPCDVMSS DVPSAQHSKC SFDLSESCEN VLKRIVDETP ESDLRVGGPG LLKWDIRPFI 120 IHKRASLPKC ALKQLKDSII DGTHPHADFL RVKSGLTRSY GDRVPVGGSN TRLNESCSSA 180 QNMGVKGNSD PLINQNENKP SEEDPDNANL LPSKGDRIAS DAENMEDENR SSINDSDDWH 240 INSKKMKQDG SYVLQSTEQN QLPLHGNERL EDSSERERCN LAGNHMGMME EGTVLEDGYD 300 DTASKRSGQS SSDAIHKSQS KNHLNATSMP EETLWDEAHQ DSCVGQAEDD GGLHPEPRTS 360 GVAPPDGTQL NVSAKVFNCN SEHDFHNKAP HPASADGSQE KSIAEDGKDL ARENLADGNR 420 NRVIHSDDCY VMAKRMKWDA SYVLQSIEQN QIPLRGRELL EDSSERDVPL SGRERRDLAE 480 NRIGMMDGGK VIEDDHDYHT ASKRCGQSTD NAVHKSQSEN LCNETSMTQG TFQDGAPQYT 540 YVDEAKDDGG LHPELRASCV AVPDETQHKI SAEVFNCNSE QDFHIEVPHP ASADDPRHKS 600 IAYEGKDDRE QCPERRISGT APLGETQHKD SAKESDSNSE HDSCIEIACP ASADGSQQKS 660 IPDEVKELLD WLRQYESETL TDNDGFHDEK IDVAMKKHAF LSSQCTSSYR FSVTADWTER 720 NLGKSNESGR LLICKTSDCP VVVHENWLRS SAIHYEKGNF YCPFCIYSLD LTEYLEAKKE 780 TSVLKKDLDA FIHTLEHQPK ECLGRPNNKE NFCMRNFDED LNEKSHQNGH LGEREENLGK 840 QCEEHANEVN DFQFQNITGD EQHVAPFASR VHVNSECGDE SATAVCRKLD VSTGEKEEEE 900 KVARECIPVG VPLSSKNTEN LLIDQGYEVN FDSEQVDNQK SSTAKYSIRP RRSKIPYSYP 960 ATHQLRRIKV PWTVEEEEML KKGVETVSRN EGNIPWKQIL EFGGSVFLHS RTPIDLKDKW 1020 RNICRRRSKS K

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MDGMNEQERA IAWLWAIEAL ASFREVDVSL LHDLVEMAPA LPDDMGKNAK ERVALRCLEG  60
LLGPCDVMSS DVPSAQHSKC SFDLSESCEN VLKRIVDETP ESDLRVGGPG LLKWDIRPFI  120
IHKRASLPKC ALKQLKDSII DGTHPHADFL RVKSGLTRSY GDRVPVGGSN TRLNESCSSA  180
QNMGVKGNSD PLINQNENKP SEEDPDNANL LPSKGDRIAS DAENMEDENR SSINDSDDWH  240
INSKKMKQDG SYVLQSTEQN QLPLHGNERL EDSSERERCN LAGNHMGMME EGTVLEDGYD  300
DTASKRSGQS SSDAIHKSQS KNHLNATSMP EETLWDEAHQ DSCVGQAEDD GGLHPEPRTS  360
GVAPPDGTQL NVSAKVFNCN SEHDFHNKAP HPASADGSQE KSIAEDGKDL ARENLADGNR  420
NRVIHSDDCY VMAKRMKWDA SYVLQSIEQN QIPLRGRELL EDSSERDVPL SGRERRDLAE  480
NRIGMMDGGK VIEDDHDYHT ASKRCGQSTD NAVHKSQSEN LCNETSMTQG TFQDGAPQYT  540
YVDEAKDDGG LHPELRASCV AVPDETQHKI SAEVFNCNSE QDFHIEVPHP ASADDPRHKS  600
IAYEGKDDRE QCPERRISGT APLGETQHKD SAKESDSNSE HDSCIEIACP ASADGSQQKS  660
IPDEVKELLD WLRQYESETL TDNDGFHDEK IDVAMKKHAF LSSQCTSSYR FSVTADWTER  720
NLGKSNESGR LLICKTSDCP VVVHENWLRS SAIHYEKGNF YCPFCIYSLD LTEYLEAKKE  780
TSVLKKDLDA FIHTLEHQPK ECLGRPNNKE NFCMRNFDED LNEKSHQNGH LGEREENLGK  840
QCEEHANEVN DFQFQNITGD EQHVAPFASR VHVNSECGDE SATAVCRKLD VSTGEKEEEE  900
KVARECIPVG VPLSSKNTEN LLIDQGYEVN FDSEQVDNQK SSTAKYSIRP RRSKIPYSYP  960
ATHQLRRIKV PWTVEEEEML KKGVETVSRN EGNIPWKQIL EFGGSVFLHS RTPIDLKDKW  1020
RNICRRRSKS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	6e-06	MYB_related family protein