PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g217300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 419aa MW: 47338.8 Da PI: 4.6841

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g217300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.5	1.2e-27	60	180	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 l ++Lk+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++s+ +++++ Pd.00g217300.m01 60 LFLRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIKSQqlSKSVT 152 66789*******999999**********85455533447789*********************************97666667 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 k+tL+f++gr +k++ktdWvm+ey l Pd.00g217300.m01 153 CKKRTLTFHEGRVSKSTKTDWVMQEYYL 180 7789********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MRSTATEEWL LPLLRGFRFH PPEEEMVNLL RKKMEGQGSQ TMPEIDYKPW NLSDNESISL 60 FLRFLKQMMQ GKASQACHII PEIDVCKYEP SDLAELLFPD SPYQPRMWFS FSRPHYKSIN 120 SLRYNRATKK GFWKITGKPR EIKSQQLSKS VTCKKRTLTF HEGRVSKSTK TDWVMQEYYL 180 TQTEPGSIPN QLSDFVLCRM KNKSAHYESD NKKLKDASIC DESADPGISG YMASNSEDDQ 240 APENNMIPEA DRHLADKELE HDLPGSGNHD AGEPGGCVSA DCDDMVQELS AQPGEYLDLP 300 FPPPEPPEPG NASVPSPIGN NDYSLPNKNN VTTNYDSKPV SNTASNFKNQ TKDEGTSEVY 360 SQPEEDLESF LQLKLDDYTW LSRILQPEQG NLLQANNSIG CNELQSPYPE TAALFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MRSTATEEWL LPLLRGFRFH PPEEEMVNLL RKKMEGQGSQ TMPEIDYKPW NLSDNESISL  60
FLRFLKQMMQ GKASQACHII PEIDVCKYEP SDLAELLFPD SPYQPRMWFS FSRPHYKSIN  120
SLRYNRATKK GFWKITGKPR EIKSQQLSKS VTCKKRTLTF HEGRVSKSTK TDWVMQEYYL  180
TQTEPGSIPN QLSDFVLCRM KNKSAHYESD NKKLKDASIC DESADPGISG YMASNSEDDQ  240
APENNMIPEA DRHLADKELE HDLPGSGNHD AGEPGGCVSA DCDDMVQELS AQPGEYLDLP  300
FPPPEPPEPG NASVPSPIGN NDYSLPNKNN VTTNYDSKPV SNTASNFKNQ TKDEGTSEVY  360
SQPEEDLESF LQLKLDDYTW LSRILQPEQG NLLQANNSIG CNELQSPYPE TAALFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	5e-26	NAC family protein