PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g215540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 101aa MW: 11420.5 Da PI: 3.9261 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.3e-07 | 7 | 55 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 WT eE + + a++ + + W++++ ++ g++ q+k+++ + Pd.00g215540.m01 7 EWTREENKAFEIAIATYNIEciekgEWEKVSLSVP-GKSIDQIKLHFMHL 55 7****************999***************.**********9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 101 aa Download sequence |
MAGAIDEWTR EENKAFEIAI ATYNIECIEK GEWEKVSLSV PGKSIDQIKL HFMHLLMDVE 60 AIESDQGPLP DYKYDEDEND GDDGNDGDHG DTKEKEMSMV P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49010.1 | 2e-15 | MYB family protein |