PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g208230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 320aa    MW: 35485 Da    PI: 7.2568
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g208230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.41e-4045106263
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                       +e+alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rknk+sss
  Pd.00g208230.m01  45 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRSSS 106
                       7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNYMDPSSGQ QHQEMSAHSL DMLVCSKTQQ QQQQQQQDRK PRPQPEQALK CPRCDSTNTK  60
FCYYNNYSLS QPRYFCKACR RYWTKGGTLR NVPVGGGCRK NKRSSSSSKR SQDQQPLTPN  120
SNNPLPSLGY DSNDLTLAFA RLQRQSCGQL GFDDQDHLSI LGNPNNTTSH GDHSILGNHG  180
LNMNTTSAAA APGFLDALRT GFLETHNGNF QNMYYGFGNG SNSSSLGEVE NGVCGEMGLH  240
TFEEMTNSTT TAVTVTTMKQ ELCNARDHQS ESNRVLWGFP WQLNGDANNN MVSNECDSGR  300
VESWNGLAPS WHGLLHSPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.12e-41Dof family protein