PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g208070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 175aa    MW: 19475.1 Da    PI: 6.8967
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g208070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.97.9e-39151096100
            DUF260   6 kvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                       ++lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la+++
  Pd.00g208070.m01  15 RILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQDLPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLAKAQ 107
                       689****************************************************************************************99 PP

            DUF260  99 ee 100
                       +e
  Pd.00g208070.m01 108 AE 109
                       87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MYGSSPRKWE GGRERILRRR CADKCVLAPY FPPTEPAKFT IAHRVFGASN IIKFLQDLPE  60
SQRADAVSSM VYEASARIRD PVYGCAGAIC HLQKQVNELQ AQLAKAQAEL VNMQCQQANL  120
VALICMEMTQ SNEQGSPQQS LDHNFIASSH GSNQSNLSFL DDTTTLGSLW EPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.15e-63LBD family protein