PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g206170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WOX | ||||||||
Protein Properties | Length: 274aa MW: 29662 Da PI: 6.3967 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.4 | 3.2e-15 | 23 | 83 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+ +++eq+ +Le+ F++ +p +ee ++ k l + +++V++WFqNrR + ++ Pd.00g206170.m01 23 RSRWIPKPEQILILESIFNSgMVNPPKEETVRIRKLLekfgTVGDANVFYWFQNRRSRSRR 83 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 104.6 | 6.4e-34 | 22 | 85 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW P+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q Pd.00g206170.m01 22 VRSRWIPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQ 85 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MEDKGQDPNS PGNGSERSSE PVRSRWIPKP EQILILESIF NSGMVNPPKE ETVRIRKLLE 60 KFGTVGDANV FYWFQNRRSR SRRRQRQLQA SLEQRNNNTN SNQVGDHQMG ISSGAIQYEI 120 SCSPPAPAPA MAFGASPTSF GSCNYLVGPS SSSSSGHHLM ADHDQQTSSS VDQFFSVSGQ 180 MGFPEIEQGS GVTSVLGGGP SDTSTLHFQS GLITVFINGV PAEVPKGPLD MKSMFGQDVL 240 LVHSSGLPLP LNEFGFLAHG LQPGESYFLV SRTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 9e-70 | WOX family protein |