PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g203350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 315aa MW: 32338.9 Da PI: 5.8252 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 84 | 3.7e-26 | 1 | 86 | 24 | 115 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskksqksaasalnlakesr 115 ++a+caar+F+L++eL +++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ +sk++++s al+la++++ Pd.00g203350.m01 1 MPATCAARVFQLTRELSHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISLRSSGSTLSAP-------PSKSASHSFPGALALAHHTH 86 9**********************************************9996666666666633333.......44444444444455555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MPATCAARVF QLTRELSHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS SLNISLRSSG 60 STLSAPPSKS ASHSFPGALA LAHHTHYDEE ALPSGGGDSG GGDSTDSYMR KRFREDLFKD 120 DNQGRGEGGG GSSGGGGSPS GNKAFKSSGG LQLQKQQQGS EGEAGPSGLL RPPSNILPPT 180 AMWAVAPAPN SGAAGSTFWM LPVTAGAGGP SMPTGTSGVG PSEAAQMWTF PSAPASHGST 240 LQAPLHFMPR FNLPSSLEFQ QAGSRGNPLQ LGSMLMQQQP SQHLGLGVAD SNLGMLAALN 300 ASYSRDLEVE FEMMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35560.1 | 3e-39 | TCP family protein |