PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g177740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 246aa    MW: 28165.7 Da    PI: 8.6325
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g177740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.26.3e-27159253128
               NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel..vglkktLvfykgrapkgektdWvmheyrl 128
                        +eke+yfF++r +ky+++ r+nr+t sg+Wkatg dk+++s k+ l  +glkk+Lv+y+g+a kg+ktdW+m+e+rl
  Pd.00g177740.m01  15 VGEKECYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKEPLqcIGLKKSLVYYRGSAGKGTKTDWMMNEFRL 92 
                       4789*************************************97443345***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSCLFSGNNE EVSTVGEKEC YFFCRRGRKY RNSIRPNRVT GSGFWKATGI DKPIYSVKEP  60
LQCIGLKKSL VYYRGSAGKG TKTDWMMNEF RLPPHGHGKT TNFLNAKDIT QEAEVWTLCR  120
IFKRIPSYKK YTPDNWKEGN TKQNPTDSSS KTCSLESENY CGEPRLSPQD SVVMQRIEKS  180
SSKPVRVDEQ VDETNQWFKF VGETPYATSY SSLRDIPSDN DFFINGNWDE LRPVVQLAVD  240
PSFPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-55NAC family protein