PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g173250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 357aa    MW: 38585.3 Da    PI: 8.4902
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g173250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-13113157347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++ + ++lG+g+W+ Iar   ++Rt+ q+ s+ qky
  Pd.00g173250.m01 113 PWTEEEHRMFLIGLQKLGKGDWRGIARNYVTTRTPTQVASHAQKY 157
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RVGSSSSSSV GGGGSGGLKL FGVRLTDGSI IKKSASMGNL  60
SSAAHYHSSS PNPDSPSSDL HDPVHVPEGY LSDDPAHASS SGNRRGDRKK GTPWTEEEHR  120
MFLIGLQKLG KGDWRGIARN YVTTRTPTQV ASHAQKYFIR QSNATRRKRR SSLFDMVPDM  180
AMDPPPVPEE QVFLPNCQEA ESEAASSLPS LNLSLSSECK PMETTHEEKV KEPDHEPVMG  240
SNGFPPMIPG FFPAYLPYPF PVWPPSAGPM RELKGGEASH QQVLRPIPIL RKEPVNVDAL  300
VGMSQLSLGD TERGHKEPSP LSLKLLGEPS RQSAFHPNAP AGEPDLSKGK SSAIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.13e-93MYB_related family protein