PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g173070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 324aa    MW: 35382.1 Da    PI: 6.4432
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g173070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.2e-17218252135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C + kTp+WR gp g+ktLCnaCG+++++ +l
  Pd.00g173070.m01 218 CLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRL 252
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MELPEFYLGG YFDAGAADFL PEKKPATAGD QFTVDDLLDF SNEDALVAEG GFLDPAADSS  60
AVTAVDSCNS SVSGGEPQFS SNRSFSDSQF SGDLCVPHDD LAELEWLSNF VEDSFSAEKD  120
LQALQFLSMT TTKPQTPETS SSSETNQNAP LFHSETPLPG KARSKRSRTA PGDWSTRLLH  180
LITPNDTIKP PKTTTCKKKD GGIGGNSNSG SDSSGRKCLH CAAEKTPQWR TGPMGPKTLC  240
NACGVRFKSG RLVPEYRPAA SPTFVSARHS NSHRKVLELR RQKEVHRSHQ HQFLSQSSIF  300
GVSNGGHDEY LIHHHNVNDF RQMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-69GATA family protein