PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g169330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 360aa    MW: 40274.9 Da    PI: 4.7199
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g169330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.3e-154186148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T++E++l+ +++  lG++ W++Ia+ ++ gRt++++k+ w+++l
  Pd.00g169330.m01 41 RGPFTKDEEKLIMQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 86
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEMHGHFMSW CVRTLQTAGL LRCGKSCRLR WTNYLRPDIK RGPFTKDEEK LIMQLHGILG  60
NRWAAIASQL PGRTDNEIKN LWNTHLKKRL LLMGIDPQTH KPVDSNCLTS TAPASLATRH  120
MAQWESARLE AEARLSRESS LFGQPPEKSE PDYFLRLWNS EVGEAFRNLT TVDKSACPSP  180
ISQASSSTKC GSVSAVTTDV GNTLTGSSTM AGDQNEDMED KICQTNTEDV GHNICQSNTE  240
DVGHNICQSN TEDVGYKICQ TNAEDLEYKS CQTNTEDMGY KIFQSNTEDV EYKPWRLNTK  300
DVMAGSDSSC SNDLEDSSDT ALQLLLNFPI NNDMSFLEDN VDDYATTPAR WTPNSFICPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-87MYB family protein