PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g168580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 293aa MW: 31335.4 Da PI: 7.2988

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g168580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.3	2.8e-38	58	162	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+qa+pai+++tgt++ +a ++ +++ +++ Pd.00g168580.m01 58 APKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsapd 143 799*************************************************************9999855521111.......122211122 PP TCP 89 .kaaksaa.kskksqksaa 105 + ++ + k+k++++s++ Pd.00g168580.m01 144 pRPGEDPPdKKKRKRNSNS 162 2222222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MTMTEKRELE PDQATTSVDL RINGGEESDS EEPAGPSQAL MLAPKDERDV AMPVAVHAPK 60 RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD GETIRWLLEQ AEPAIIAATG 120 TGTVPAIAMS VNGALKIPTS APDPRPGEDP PDKKKRKRNS NSEYVDLSDG VSASAGLAPL 180 TTERHHQQPA VQAVVPQGVL PMWAIPSNGV VPGAFFMVPS ASTQPHIFTF PTTVAAAPFI 240 NISARPISSF VGPSSASATT HMAASTAPQT LRDFSLEIYD KKELQFMSGS SNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-75	TCP family protein