PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g166990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 336aa MW: 38454.7 Da PI: 4.2303

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g166990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.2	1.6e-23	6	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 +p+G+rF P++eel+ +yL +kv+g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+W Pd.00g166990.m01 6 VPVGYRFTPSEEELLLHYLLPKVNGNDYPK-GVVPNCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 95 599**********************999.99***98797423322..24355688***************643344999 PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k + k++ + g+++g++k + + + +p+ +W+m e++l Pd.00g166990.m01 96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137 ********9.999*******655555..89*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MAGYQVPVGY RFTPSEEELL LHYLLPKVNG NDYPKGVVPN CDLYGTKEPW EIWRDFHHSS 60 PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM 120 NPGSPHDDRW IMLEFQLDES LVQVPNKETI VLCLVRKKET SGKSKLEERQ NHEVDMASRG 180 EIQAQHVHDD QQQHIDASTY DQLRFLDDYL MNDVGGEQNT MVNQSLLAQY DQQDMIGSST 240 EDQLRVLEDF LMNDVEGEQD TMVNPTLLAQ YDQQDMIGTS TEDQLRVLEE FLMNDVEGEE 300 DTMVNPASLA QYGQQGTSIE DQLKFLEDYL MSDIEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-20	NAC family protein