PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g160420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 264aa MW: 28976.2 Da PI: 4.7153 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.7e-08 | 208 | 236 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 r++W++ Ed+ l+ +v+++G g+W+ I r Pd.00g160420.m01 208 RKKWSEAEDLELIAGVRRYGEGNWANILR 236 799************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MVEKPKDPEK SYITEEDTVN LLHRYKAANV LQLLQEVAHS QDVKIDWNQL AEKTSTGISN 60 AREYQMLWRH LAYSEAFVDN FDNGAQPVDD DSDLEHELEA FPAVSCEDST EAAACVKVLM 120 ASGLPSDSTH RSGATVEAPL TINIPNGQPS RTHQNSQPPC SMQGMNITVP VSVQKQPLLA 180 MTTSTGATAE GGDANGSASN NMAPRKKRKK WSEAEDLELI AGVRRYGEGN WANILRGDFK 240 GERTANQLSQ GGWIVFVNDV NFGW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 210 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.1 | 1e-77 | MYB_related family protein |