PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g152350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 457aa MW: 51928.1 Da PI: 4.1896

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g152350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.5	1.1e-18	8	144	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv..ePwdLpk.....kvkaeekewyfFskrdkkyat.gk.rknratk..sg 81 +GfrF+Ptd+el++ +L k v +kk + +++i++++i+ + eP+++ + +++ +++e+yfFs+ ++ +++ g+ + nr++ g Pd.00g152350.m01 8 VGFRFRPTDQELITLFLYKMVVEKKalmATYDNIIRKFNIFGTefEPSEIWNgfggeQLHPHDQELYFFSELNTLSSKaGSrKINRKVGlgGG 100 7*****************99999785455567*985533975466666666999***99887765344155776555599 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +W+ +v++++g+++g k+ + + + + + e++ W+++ey+l Pd.00g152350.m01 101 TWSGERC-DAVYDEEGNEIGHKRKFRYEN--EGSEEHSGWFLEEYSL 144 998766.678888**********984..334469******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MADSDDRVGF RFRPTDQELI TLFLYKMVVE KKALMATYDN IIRKFNIFGT EFEPSEIWNG 60 FGGEQLHPHD QELYFFSELN TLSSKAGSRK INRKVGLGGG TWSGERCDAV YDEEGNEIGH 120 KRKFRYENEG SEEHSGWFLE EYSLSGEGCA FDYVICRLRK NERLFGNKRK SSSSLSEHQY 180 PKKKMLTKPK PSLTTKGKKV KKDEQQMGSE ENMNLEPQNY RSPSTLVVSD DEKGNNHLTY 240 NNHDDQFINN SNYFPDDNTM MINDIITVDD INTLDDAKMI FSDMEWPLPD LPQIVDQNHV 300 PLPASSGGAD SVDGVIEACE PSNLVNDNQM GNNNSDEHQD ELLNNTDYCP HDTLIFLGDS 360 DEEGYLINSP TIDDYMDELF PDLPGEWPLP QMPQMAATDE SQVPFPTSEV GAESTNGGEL 420 EAYCNPSHFQ NMGNYQPLEE DINCFSNYSF VDELMGH

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MADSDDRVGF RFRPTDQELI TLFLYKMVVE KKALMATYDN IIRKFNIFGT EFEPSEIWNG  60
FGGEQLHPHD QELYFFSELN TLSSKAGSRK INRKVGLGGG TWSGERCDAV YDEEGNEIGH  120
KRKFRYENEG SEEHSGWFLE EYSLSGEGCA FDYVICRLRK NERLFGNKRK SSSSLSEHQY  180
PKKKMLTKPK PSLTTKGKKV KKDEQQMGSE ENMNLEPQNY RSPSTLVVSD DEKGNNHLTY  240
NNHDDQFINN SNYFPDDNTM MINDIITVDD INTLDDAKMI FSDMEWPLPD LPQIVDQNHV  300
PLPASSGGAD SVDGVIEACE PSNLVNDNQM GNNNSDEHQD ELLNNTDYCP HDTLIFLGDS  360
DEEGYLINSP TIDDYMDELF PDLPGEWPLP QMPQMAATDE SQVPFPTSEV GAESTNGGEL  420
EAYCNPSHFQ NMGNYQPLEE DINCFSNYSF VDELMGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02250.1	2e-09	NAC family protein