PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g149990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 224aa MW: 25267.5 Da PI: 9.6943

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g149990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.6	1.6e-21	86	145	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ Pd.00g149990.m01 86 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 145 7***************99************************************97 PP
2	Wus_type_Homeobox	118.5	3e-38	86	147	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq Pd.00g149990.m01 86 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 147 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MKVHQFARGL WEHEPSLSLG CTKRLRPLAP KLANTTASDT TTTALAPFDL KSFIRPESGP 60 RKLGSSDHQE KKDSPHPQVE THPGGTRWNP TQEQIGILEM LYRGGMRTPN AQQIEQITAQ 120 LGKYGKIEGK NVFYWFQNHK ARERQKQKRN SLGLSHSPRT PTPVITNLGE VVGEREEDSP 180 YKRKCRSWGF DCSVEDSVVC KADEVVEGGR GRTLELFPLH PEGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	2e-74	WOX family protein