PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g145100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 462aa MW: 53132.1 Da PI: 8.0805

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g145100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.6	5.5e-20	31	105	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA+++GF+vr+ + ++s+++g++ +r+fvCskeg++ + +rtgC a ++v+++++gkw+v+ + ++HnH l Pd.00g145100.m01 31 DFYSLYATRMGFRVRTGQLYRSRTDGSVSSRRFVCSKEGFQIS--------------SRTGCPALIRVQRRDSGKWVVDLFLKDHNHGL 105 6*************************************765..............699*************************98 PP
2	FAR1	67.9	2.5e-21	185	260	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA+++GF++r+ + +sk +g+it+r+fvCskeg++++ +r+gC a +++k++++g+w+v++l+++HnHel Pd.00g145100.m01 185 QFYHVYAENTGFRIRIGQLFRSKLDGSITSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRQDSGRWVVDRLDKNHNHELE 260 6*************************************999..............4899*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MKTVNAEDEG ESRVLEPYVG LEFDSADVAR DFYSLYATRM GFRVRTGQLY RSRTDGSVSS 60 RRFVCSKEGF QISSRTGCPA LIRVQRRDSG KWVVDLFLKD HNHGLGFTEE NHSPILQKNT 120 LTRKNSIVEL SHRPKIKSIE EIEDGRPCPS GIISAKRFKW DGDEMQPEVE PSAGLEFNSA 180 NEAYQFYHVY AENTGFRIRI GQLFRSKLDG SITSRRFVCS KEGFQHPSRV GCGAFMRIKR 240 QDSGRWVVDR LDKNHNHELE SQLEVQKTNL FSSKKFIEEE IGGLENEDIV DINNGNNVQR 300 RRENHIGSDW IFQKELLQSY SYLGFKIYEE GATIRYLVRK CGNDNEKCVV TVGPSNPKVI 360 CSCRMFEFEG VLCRHVLRVF QILDLKEVPP CYILQRWTKN AEYGIPCDSE SGGNPQELKA 420 LMVWSLREAA CQYIEAGATS LEKHRLAYEI MREGGRKLCW QR

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MKTVNAEDEG ESRVLEPYVG LEFDSADVAR DFYSLYATRM GFRVRTGQLY RSRTDGSVSS  60
RRFVCSKEGF QISSRTGCPA LIRVQRRDSG KWVVDLFLKD HNHGLGFTEE NHSPILQKNT  120
LTRKNSIVEL SHRPKIKSIE EIEDGRPCPS GIISAKRFKW DGDEMQPEVE PSAGLEFNSA  180
NEAYQFYHVY AENTGFRIRI GQLFRSKLDG SITSRRFVCS KEGFQHPSRV GCGAFMRIKR  240
QDSGRWVVDR LDKNHNHELE SQLEVQKTNL FSSKKFIEEE IGGLENEDIV DINNGNNVQR  300
RRENHIGSDW IFQKELLQSY SYLGFKIYEE GATIRYLVRK CGNDNEKCVV TVGPSNPKVI  360
CSCRMFEFEG VLCRHVLRVF QILDLKEVPP CYILQRWTKN AEYGIPCDSE SGGNPQELKA  420
LMVWSLREAA CQYIEAGATS LEKHRLAYEI MREGGRKLCW QR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	1e-126	FAR1 family protein