PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g137610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 703aa MW: 79911.1 Da PI: 7.5556

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g137610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.3e-20	94	187	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel Pd.00g137610.m01 94 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHEL 186 6*************9998874556679***************9***************98887676789***********9 PP FAR1 90 a 90 Pd.00g137610.m01 187 L 187 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MTGPSQARSS RSQSNGSERT YTHFGWVGDM IWMLRRLKKS RMSEGTSLGM EDLSQDDIGT 60 IEETAEDTIL SRQTSVNLVP FVGQRFVSQE AAYEFYCSFA KQCGFSIRRH RTRGKDGVGR 120 GVTRRDFTCH RGGYPQMKPS EDGKMQRNRK SSRCGCQAYM RIVKRADFDV PEWRVTGFSN 180 IHNHELLKSN EVRLLPAYCS ISTDDKSRIC MFAKAGMSVR QMLRLMELEK GVKLGCLPFT 240 EIDVRNLLQS FRNVDRDNDA IDLIAMCKKM KDENPNFKYE FKIDGHNRLE HIAWSYASSV 300 QLYEAFGDTT VFDTTHRLDA YDMLLGIWLG VDNHGMTCFF GCVLLQDENI QSFSWALKTF 360 LGFMKGKAPQ TMLTDHNMWL KEAIAVDMPQ SKHAFCIWHI VAKKMEGNEM MSTSQAESIN 420 AFIQRFLSAQ SQLDRFVEQV ADIVDYNDRV GAKQKMQRKM QRVCLKTGSP IESHAASVLT 480 PYAFGKLQEE LVLAPQYASL LVDEGCFQVR HHTEEDGGCK VVWIPCQGHI SCSCYQFEFS 540 GILCRHVLRV LSTNNCFHIP DQYLPTRWCG VSSSSTNTFE TATMKDNSEK IHLLESLAST 600 LVTESVETED RLNAACEQIA MALSRVRDLP RTTHNAIDIA YNCPSESLIL QDVEEADGII 660 RFTVGNSHES VTLGKLKERR PRDIVEISRK RRHCSGPCCL SVQ

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MTGPSQARSS RSQSNGSERT YTHFGWVGDM IWMLRRLKKS RMSEGTSLGM EDLSQDDIGT  60
IEETAEDTIL SRQTSVNLVP FVGQRFVSQE AAYEFYCSFA KQCGFSIRRH RTRGKDGVGR  120
GVTRRDFTCH RGGYPQMKPS EDGKMQRNRK SSRCGCQAYM RIVKRADFDV PEWRVTGFSN  180
IHNHELLKSN EVRLLPAYCS ISTDDKSRIC MFAKAGMSVR QMLRLMELEK GVKLGCLPFT  240
EIDVRNLLQS FRNVDRDNDA IDLIAMCKKM KDENPNFKYE FKIDGHNRLE HIAWSYASSV  300
QLYEAFGDTT VFDTTHRLDA YDMLLGIWLG VDNHGMTCFF GCVLLQDENI QSFSWALKTF  360
LGFMKGKAPQ TMLTDHNMWL KEAIAVDMPQ SKHAFCIWHI VAKKMEGNEM MSTSQAESIN  420
AFIQRFLSAQ SQLDRFVEQV ADIVDYNDRV GAKQKMQRKM QRVCLKTGSP IESHAASVLT  480
PYAFGKLQEE LVLAPQYASL LVDEGCFQVR HHTEEDGGCK VVWIPCQGHI SCSCYQFEFS  540
GILCRHVLRV LSTNNCFHIP DQYLPTRWCG VSSSSTNTFE TATMKDNSEK IHLLESLAST  600
LVTESVETED RLNAACEQIA MALSRVRDLP RTTHNAIDIA YNCPSESLIL QDVEEADGII  660
RFTVGNSHES VTLGKLKERR PRDIVEISRK RRHCSGPCCL SVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-164	FAR1 family protein