PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g137050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 395aa MW: 44102.8 Da PI: 9.4157

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g137050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	141	9.5e-44	167	318	3	132
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec.e 74 g kdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k +ikel + s + + Pd.00g137050.m01 167 GNKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKSSIKELKQHlnisplaayscstnanatstS------TiT 253 78***********************************************************999999999987655433321......122 PP TCP 75 aesssssasnsssg.....kaaksaa.kskksqksaas.alnlakesrakarararertrekmri 132 a+++ss+++ns+ + a+ +a+ + ++++++ +a+esra+arararertrekm+ Pd.00g137050.m01 254 AKMNSSTSENSEVAskiqeTANGDAHwIGTLERDKKNRkLCVVARESRAEARARARERTREKMMR 318 222222222222224444533333334444444444440456666****************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MFPSSSSASN YQLPFPCDTN QQPQLLENSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS 60 EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS 120 NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG 180 PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC 240 STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHW IGTLERDKKN RKLCVVARES 300 RAEARARARE RTREKMMRTR SGGHYLWSSN CPNDQLFEPG MMMNSMVMSI NHHDEKVVGS 360 TTIPSGANSE DYDFPSFPGN WGQINNSKNI TGYCK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MFPSSSSASN YQLPFPCDTN QQPQLLENSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS  60
EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS  120
NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG  180
PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC  240
STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHW IGTLERDKKN RKLCVVARES  300
RAEARARARE RTREKMMRTR SGGHYLWSSN CPNDQLFEPG MMMNSMVMSI NHHDEKVVGS  360
TTIPSGANSE DYDFPSFPGN WGQINNSKNI TGYCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-32	TCP family protein