PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g136280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 305aa MW: 34413.6 Da PI: 6.5026 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.9e-18 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W++ a++ g++Rt+k+c++rw++yl Pd.00g136280.m01 20 RGPWTLEEDTLLIHYIASHGEGHWNSLAKCAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ +++++ ++G++ W++Ia++++ gRt++++k++w++ Pd.00g136280.m01 73 RGNLTPQEQLMILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MAAVTKRACN PNEEETDLRR GPWTLEEDTL LIHYIASHGE GHWNSLAKCA GLKRTGKSCR 60 LRWLNYLKPD IKRGNLTPQE QLMILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 QARQLNIESN SKRFLDAVRC FWMPALLQKM EQSSSSYLPT TLSSQNSASP SLSPNCSAPS 180 ISLSTSPPSK VSQIFEHPMN GNSNSVTSPS IFSSDSLISQ LPQTSERLTS PTHAFDHTVY 240 SSSPVLNDCY YVDTSSGYAY DMEGLNLDPA SAICDFDNQQ FDCQMTAGDW MLDNMTDTLW 300 NMEGM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 2e-85 | MYB family protein |