PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g132120.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 649aa MW: 74361 Da PI: 8.5508 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.9e-09 | 592 | 636 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ Pd.00g132120.m01 592 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKTVNQCKKKFT 636 6********************************.*********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 649 aa Download sequence |
MNVQSKFRLI SYSQELVDGQ PVYVTSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA 60 DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR 120 ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEVDSFY DFWYTFKSWR 240 EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLVDNAYK RDPRIVRRKE 300 AEKAEKQRKK EAKYLAKKLQ EEEAARAVEE EKRRKEEEEK RAAEIALQQK KLKEKEKKLL 360 RKERSRLRTL SGPVISNRLL SLAEDDVESL CMSLDIEQLR NICERMEGKE GLERAEVLRD 420 ACGYKNDLEG KKEDEKKTLQ QNGSVETNGT VLLGSYEKKE KPWSREEIEL LRKGMLKFPK 480 GTSRRWEVVS DYIGTGRSVE EILKATKTVL LQKPDSSKAF DSFLEKRKPT PSIASPLTTR 540 IEVEGVLTPQ GTETPAEKVD KSGESSSGST KDQNPNDPIA ENGVSSGSEQ DVWSAVQERA 600 LVQALKTFPK EASQRWERVA AAVPGKTVNQ CKKKFTLLKE SFRNKKSSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 332 | 355 | KRRKEEEEKRAAEIALQQKKLKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |