PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1296490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 746aa MW: 82466.7 Da PI: 6.053

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1296490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.3e-08	196	243	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a +L + +++++sLq Pd.00g1296490.m01 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243 79************************9....888999999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MDPTGPTVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT KAMELLHLSP 60 EANSTPTPAA ISGEARVQHP FNSSLTFPTN PALIERAAKF SIFGGEGAPE TSSMPSNSGA 120 DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDADK 180 VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ 240 SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP 300 YHQQWHFDTH QPGWGREEET HTFITPETSL ISCDSSANSA TLQTSHLKME ICPALSPCHV 360 TFPPGRTYLT ATIRLKSGVV LDIQEGATLL GGPRLEDYPK EQNKWYVVLA ENASDVGISG 420 GGVVDGQGLK FVTRFDERKN VMVSWNWTGA CLGDECRPRL VGFINCRNVN LSNLRLRQPA 480 YWCLHIVQCE NVLIQDVSIY GDFNTPNNDG IDIEDSNNTV ITRCHIDTGD DAICPKTSTG 540 PLYNLTVTNS WIRTKSSAIK LGSASWFDFK GFVFDNITIV DSHRGLGIQI RDGGNVSDIT 600 FSNINISTRY YDPSWWGRAE PIYVTTCPRH SNSKEGSISN LLFVNITSTS ENGVFLSGSK 660 GGLLSDLRFI NLNLTYRRWT NDAGGLVDYR PGCQGLVNHS TAGIIMEHID GLVIDNVNMR 720 WSDEPLRQWN DPLDFSSSSS PNNLEG

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MDPTGPTVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT KAMELLHLSP  60
EANSTPTPAA ISGEARVQHP FNSSLTFPTN PALIERAAKF SIFGGEGAPE TSSMPSNSGA  120
DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDADK  180
VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP  300
YHQQWHFDTH QPGWGREEET HTFITPETSL ISCDSSANSA TLQTSHLKME ICPALSPCHV  360
TFPPGRTYLT ATIRLKSGVV LDIQEGATLL GGPRLEDYPK EQNKWYVVLA ENASDVGISG  420
GGVVDGQGLK FVTRFDERKN VMVSWNWTGA CLGDECRPRL VGFINCRNVN LSNLRLRQPA  480
YWCLHIVQCE NVLIQDVSIY GDFNTPNNDG IDIEDSNNTV ITRCHIDTGD DAICPKTSTG  540
PLYNLTVTNS WIRTKSSAIK LGSASWFDFK GFVFDNITIV DSHRGLGIQI RDGGNVSDIT  600
FSNINISTRY YDPSWWGRAE PIYVTTCPRH SNSKEGSISN LLFVNITSTS ENGVFLSGSK  660
GGLLSDLRFI NLNLTYRRWT NDAGGLVDYR PGCQGLVNHS TAGIIMEHID GLVIDNVNMR  720
WSDEPLRQWN DPLDFSSSSS PNNLEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42300.1	1e-96	bHLH family protein