PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1291560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 214aa    MW: 24064.5 Da    PI: 4.5643
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1291560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2188.2e-063456123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       y+C+ C++sFs+   L  H++ H
  Pd.00g1291560.m01 34 YTCTFCTRSFSNAQALGGHMNIH 56
                       9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MERNHSSNNI ENFDQIKWSS SDDQISGSGQ PKSYTCTFCT RSFSNAQALG GHMNIHRRDR  60
ARIRQFSEDQ NHLANISSTD GITKNPSARH SRAKSEDKIS IQMELNETNI PRNPILSYPF  120
TRDEDDDVVI IDAANKGEVG IEEVQVQLQL QLPLFVEEPS GLACTVDINK NTGECTSGCR  180
DEETMKRAEE LDLELRLGPE PTETPSTLST RDFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.13e-15C2H2 family protein