PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1291210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 662aa MW: 73913.7 Da PI: 9.8768 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.5 | 5.6e-07 | 569 | 618 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pd.00g1291210.m01 569 RRPFSVPEVEALVQAVEKLGTGRWRDVKLRAFdgaKHRTYVDLKDKWKTL 618 567888899*****************99888889*************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 662 aa Download sequence |
MVLQRRLDYG FNGYQVPEVP RASRSARGRG PIKKKLEANQ IRAFEILASV AGKLLQESEH 60 PLPTNDSCGK DAHFIFDDTS KSKQEKGNLS KEDRCERGSC DEQTLLCVGR MQECQQSYTL 120 NGVSHSQENF SYEINRASKS FDHSESIYSN KVFSDSPLSG DSVEEKPRGV LKRKLETGPS 180 KDTSIEDERT QILGNSEDVM KVEGMPPELV SCGHDVKTSF SGDCKNHDRL LCHCANIKVD 240 SRDDDENCVR YAQPLSVVKE FEHPPDASDE KINNLAASRH WRVAPERRIG GYSRNDGKIR 300 QVYRHGRTCY THQRSQKIYP FKKRKFFNRM PLATPDRGFN CESIFNSPDK RVNSDNYCAE 360 IGPSSSTTGG QVPLKSSDCN VKLSIKSFKV PDLFIEIPAT ATVGSLKRTV MEAVTSILGD 420 GLHVGILVRG KKVRDDNKTL LQTGISQDEK SRNLGFMLEP KRAKLTYSPR SKDPSLPSGR 480 SRELTRHSAS LVTQPGTSNV SPNPPVINFG GCVKRDLNAV PSLPSTSTGK TPQASQALVA 540 VPPISMNALA VVPFHRKSGH PEYVQRRIRR PFSVPEVEAL VQAVEKLGTG RWRDVKLRAF 600 DGAKHRTYVD LKDKWKTLVH TARISPQQRR GEPVPQELLD RVLAAHACWS QRRAKQQVKA 660 AV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 316 | 325 | QKIYPFKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-111 | MYB_related family protein |