PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1291060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 321aa    MW: 36647.8 Da    PI: 9.8037
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1291060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.4e-122670147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k +  +w  +
  Pd.00g1291060.m01 26 KGSLTEEEQRLVICLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 70
                       6788******************.*********.*****999999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MNTPLNRDAK SCLERWKNYL KPGIKKGSLT EEEQRLVICL QAKHGNKWKK IAAEVPGRTA  60
KRLGKWWEVF KEKQQREQKN NKTVDPVDEG KYDRILETFA EKLVQERAAP SYLMATSNGS  120
YLHTETSSPA PTMLPPWLSN SNVTSNVRPP SPSVTLSLSP TVAPSPPIPW LQPDRGSDNS  180
IVLGNMPHHG SVPVCGENLV ISELVECSRE LEEVHRAWAA HKKEASWRLR RVELQLESEK  240
ACRRREKMEE IEAKVKALRE EQKAALDRIE AEYREQLAGL RRDAEAKEQK LTEQWVAKHL  300
RLSKFLDQMG GRPRLAEPNG R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-125MYB family protein