PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1289110.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 642aa MW: 68327.6 Da PI: 7.2525

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1289110.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	8.9e-08	208	252	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I r g Rt+ q+ rw Pd.00g1289110.m01 208 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 252 789************************8721344.78888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MVEKTKDPKK CSITEEDTAT LLQRYTATTV LALLQEVAHW PEAKIDWIRL VAKTSTGISN 60 AREYQMLWRH LAHREALVDK FDNGSQPLDD DSDLEYELEA FPAVCGEAST EAAACVKVLI 120 ASGLPSDSSH RNGTTVEAPL TINIPNGQPS RTHENSEPTC SMQGKNITVP VSVKKQPLPA 180 ATTSSVATAD GGDANGSASN SMASRKKRKK WSEAEDFELI AAVQKCGEGN WANILRADFK 240 GDRTAGQLSQ RWAIIKKRNQ ELNLRGNSSG KLSEAQLAAR HSLSVALNMP NLTAKTIGTA 300 GTNAHNKFAR KVATSNSVLT TGTKAEPQSQ QDLKPTKKPY QMELLGSTTK SRVTSKNTLT 360 KPNCNDDDKV RAIAVAAGAR IASPSDAASL LKAAQAKNTV HIMPTGGSSI QSSLPGGMST 420 HSEPHPNLHM RTGLAGITLS TPPPTDVTPS AVHPGSSKAL PLMSQHTPTN GTLLSKQIKG 480 VSCSLDAKLP SKQEVRTEEG SVIAELGCTP IVLAQDEAVI SRNGQDEQVK DDKVDSPNQK 540 AELKILSSNA ENPVSSLNIE RDETHHKAVI SVQGEQRQSA KDNEVVCSLI GGGDPSAVDS 600 SEKPSTTEKQ TDLLGTVTDG CNGKHVLSKE EAGIKINGEH EG

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MVEKTKDPKK CSITEEDTAT LLQRYTATTV LALLQEVAHW PEAKIDWIRL VAKTSTGISN  60
AREYQMLWRH LAHREALVDK FDNGSQPLDD DSDLEYELEA FPAVCGEAST EAAACVKVLI  120
ASGLPSDSSH RNGTTVEAPL TINIPNGQPS RTHENSEPTC SMQGKNITVP VSVKKQPLPA  180
ATTSSVATAD GGDANGSASN SMASRKKRKK WSEAEDFELI AAVQKCGEGN WANILRADFK  240
GDRTAGQLSQ RWAIIKKRNQ ELNLRGNSSG KLSEAQLAAR HSLSVALNMP NLTAKTIGTA  300
GTNAHNKFAR KVATSNSVLT TGTKAEPQSQ QDLKPTKKPY QMELLGSTTK SRVTSKNTLT  360
KPNCNDDDKV RAIAVAAGAR IASPSDAASL LKAAQAKNTV HIMPTGGSSI QSSLPGGMST  420
HSEPHPNLHM RTGLAGITLS TPPPTDVTPS AVHPGSSKAL PLMSQHTPTN GTLLSKQIKG  480
VSCSLDAKLP SKQEVRTEEG SVIAELGCTP IVLAQDEAVI SRNGQDEQVK DDKVDSPNQK  540
AELKILSSNA ENPVSSLNIE RDETHHKAVI SVQGEQRQSA KDNEVVCSLI GGGDPSAVDS  600
SEKPSTTEKQ TDLLGTVTDG CNGKHVLSKE EAGIKINGEH EG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	210	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	1e-75	MYB_related family protein