PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1284670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 307aa    MW: 33158.9 Da    PI: 7.2849
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1284670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.9e-10654347
                       SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                        W +eEd+ + +a++++  +     +W++Ia+ ++  ++ +++k ++q++
  Pd.00g1284670.m01  6 VWNKEEDKAFENAIAMHWIDeeseeQWEKIAELVP-SKSMEELKQHYQML 54
                       6**********************************.************86 PP
2Myb_DNA-binding40.75.5e-13134178347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  Pd.00g1284670.m01 134 PWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKY 178
                        7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSSASVWNKE EDKAFENAIA MHWIDEESEE QWEKIAELVP SKSMEELKQH YQMLVDDVSA  60
IEAGHTPLPN YAAAEEATSS SKDTAARASS GASASDKRLN CGHGGGFSAL AHDTSGHGGK  120
GGSRSDQERK KGIPWTEEEH RLFLLGLEKF GKGDWRSISR NFVISRTPTQ VASHAQKYFI  180
RLNSMNRDRR RSSIHDITSV NNGDVSSHQP PITGQQTNTY APSAAAAGAT TIGVGPQSVK  240
HRAHQPHMAG LGMYGAPMGH PVSAPPGHHM GSAVGTPVML PPGHHPHTHP PYVVPVAYPM  300
AHPTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-80MYB family protein