PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1282870.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 411aa MW: 45683.4 Da PI: 7.8768

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1282870.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.7e-32	290	343	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Pd.00g1282870.m01 290 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 343 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.7e-15	291	342	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Pd.00g1282870.m01 291 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 342 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE 60 SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK 120 NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE QTHYSRVDRD QRDDFDSNKL 180 RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTFNGMTMDS PSQRQHYFPS YNLNHLQQQR 240 QQCSVGGVSG GPNYSYNYNS DLPSNGFIMR SRFTPTKLSQ NINKRNMRAP RMRWTTSLHA 300 RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKNTDKP LGSSDGSGDE 360 DLLSTTTTHH HNSSALLNQR GASNLEHDME HHHHPSSNNL WGNSSRYDLH L

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE  60
SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK  120
NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE QTHYSRVDRD QRDDFDSNKL  180
RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTFNGMTMDS PSQRQHYFPS YNLNHLQQQR  240
QQCSVGGVSG GPNYSYNYNS DLPSNGFIMR SRFTPTKLSQ NINKRNMRAP RMRWTTSLHA  300
RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKNTDKP LGSSDGSGDE  360
DLLSTTTTHH HNSSALLNQR GASNLEHDME HHHHPSSNNL WGNSSRYDLH L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-38	G2-like family protein