PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1280060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 367aa MW: 40717 Da PI: 8.7502

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1280060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.2	5.9e-38	167	269	3	104
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaessss 80 g kdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k +ikel + + Pd.00g1280060.m01 167 GNKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKSSIKELKQHlnisplaayscstnA-------------N 245 78*************************************************************766444444432220.............2 PP TCP 81 sasnsssgkaaksaakskksqksa 104 ++s+s+++++++s+++++++ +s+ Pd.00g1280060.m01 246 ATSTSTITAKMNSSTSENSEVASK 269 222222222222222111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MFPSSSSASN YQLPFPCNTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS 60 EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS 120 NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG 180 PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC 240 STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHS IGTLERDKKN RKLCGHYLWS 300 SNCPNDQLFE PGMMMNSMVM SINHHDEKVV GSTTIPSGAN SEDYDFPSFP GNWGQINNSK 360 NITGYCK

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MFPSSSSASN YQLPFPCNTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIRQYYSHYS  60
EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS  120
NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG  180
PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFTKSK SSIKELKQHL NISPLAAYSC  240
STNANATSTS TITAKMNSST SENSEVASKI QETANGDAHS IGTLERDKKN RKLCGHYLWS  300
SNCPNDQLFE PGMMMNSMVM SINHHDEKVV GSTTIPSGAN SEDYDFPSFP GNWGQINNSK  360
NITGYCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-32	TCP family protein