PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1276210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 1261aa MW: 136104 Da PI: 6.4087

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1276210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	157.1	2.8e-49	115	209	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 vreqd+++Pianv+rim+++lP +akis+daket+qecvse+i+f+t+ea+++cqre+rkt++++d+lwa+++lGf++yvepl+++l+k+re Pd.00g1276210.m01 115 VREQDQYMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYIAFITGEANERCQREQRKTVTAEDILWAMGKLGFDNYVEPLTLFLQKHRE 206 59****************************************************************************************** PP NF-YB 93 leg 95 e+ Pd.00g1276210.m01 207 SEN 209 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1261 aa Download sequence
MCLGKEMAYV QIKSVVAAVM YEFEVVVVNG GVTAKKMMNP PYILSLVLKG RLASKRKSDD 60 MSTRASMRGA QVNNSERSNS KAPINATPAA TNSNAAAAAA NAGDPAQLAP QHSVVREQDQ 120 YMPIANVIRI MRRILPPHAK ISDDAKETIQ ECVSEYIAFI TGEANERCQR EQRKTVTAED 180 ILWAMGKLGF DNYVEPLTLF LQKHRESENS DRSTLRAEFM KRDRGVDFGP AGPPIALMPP 240 PPPPYGPGYH FGPQHGPGMF DPSMFGMFRD GSSSGSGGGA GSSSASGDQG KNSLEGFDPF 300 AQFNFYLFSS THSLASSSSS IKGLMDSNNL DGGVDAKGMD DLKEPLLKPL DINNKDKRIR 360 TVKFKVGDIE CASCATTIES VLGKLDGVKN ATVSPIQGQA AVNYIPELIN AKKIKEAIED 420 AGFPVDEFPE QDVAVTRLRI KGMACTSCSE SVESALRMIA GVKNAVVGLA LEEAKIHFDP 480 SLIDTSCIIQ AIEDAGFGAD LISSGNDVNK VHLKLEGVNS PEDMSIVQSS LESVEGVNNV 540 EVDFAEKKVT IAYDSNLTGP RSLIHCVEKA GRDFKLYQAS LYVPPRRREA EQKHEIQMYR 600 NQFFLSCLFS VPIFFFSMVL PMLPPYGNWL EYKVHNTLTV GMLLRWILCT PVQFIVGRRF 660 YVGSYHALRR RSANMDVLVA LGTNVAYFYS VYIAVKALAL DKFEGQDFFE TSSMLISFIL 720 LGKFLEVIAK GKTSDALAKL TDLAPDTAYL LSLDDDGNVI SEMEISTQLI QRNDILKIVP 780 GAKVPADGIV VSGQSYVNES MITGEARPIA KRLGDKVIGG TINENGCVQV KATHVGAETA 840 LSQIVQLVEA AQLARAPVQK LADQISKFFV PTVVIAAFLT WLGWFIPGEF GLYPKHWIPK 900 GMDKFELALQ FGISVLVVAC PCALGLATPT AVMVATGKGA SQGVLIKGGN SLEKAHKVKT 960 VVFDKTGTLT VGKPEVVSAV LFSNYSMEEF CAVATAAEAN SEHPIAKSIV EHATRLLTKF 1020 GSTEHVMEAK DFEVRPEVEE YVSENEKLAR TCVLVAIDGK VAGSFAVTDP VKPEAARVIS 1080 YLHSMSISSI MVTGDNWATA AAIAKEVGID KVYAETDPLG KADRIKELQL KGLTVAMVGD 1140 GINDSPALVA ADVGMAIGAG TDVAIEAADI VLMKSNLEDV VTAIHLSRKT MSRIRLNYVW 1200 ALGYNILGMP IAAGVLFPFT GIRLPPWLAG ACMAASSLSV VCSSLLLQSY KKPLHISAKS 1260 A

Sequence ? help Back to Top

Protein Sequence Length: 1261 aa Download sequence

MCLGKEMAYV QIKSVVAAVM YEFEVVVVNG GVTAKKMMNP PYILSLVLKG RLASKRKSDD  60
MSTRASMRGA QVNNSERSNS KAPINATPAA TNSNAAAAAA NAGDPAQLAP QHSVVREQDQ  120
YMPIANVIRI MRRILPPHAK ISDDAKETIQ ECVSEYIAFI TGEANERCQR EQRKTVTAED  180
ILWAMGKLGF DNYVEPLTLF LQKHRESENS DRSTLRAEFM KRDRGVDFGP AGPPIALMPP  240
PPPPYGPGYH FGPQHGPGMF DPSMFGMFRD GSSSGSGGGA GSSSASGDQG KNSLEGFDPF  300
AQFNFYLFSS THSLASSSSS IKGLMDSNNL DGGVDAKGMD DLKEPLLKPL DINNKDKRIR  360
TVKFKVGDIE CASCATTIES VLGKLDGVKN ATVSPIQGQA AVNYIPELIN AKKIKEAIED  420
AGFPVDEFPE QDVAVTRLRI KGMACTSCSE SVESALRMIA GVKNAVVGLA LEEAKIHFDP  480
SLIDTSCIIQ AIEDAGFGAD LISSGNDVNK VHLKLEGVNS PEDMSIVQSS LESVEGVNNV  540
EVDFAEKKVT IAYDSNLTGP RSLIHCVEKA GRDFKLYQAS LYVPPRRREA EQKHEIQMYR  600
NQFFLSCLFS VPIFFFSMVL PMLPPYGNWL EYKVHNTLTV GMLLRWILCT PVQFIVGRRF  660
YVGSYHALRR RSANMDVLVA LGTNVAYFYS VYIAVKALAL DKFEGQDFFE TSSMLISFIL  720
LGKFLEVIAK GKTSDALAKL TDLAPDTAYL LSLDDDGNVI SEMEISTQLI QRNDILKIVP  780
GAKVPADGIV VSGQSYVNES MITGEARPIA KRLGDKVIGG TINENGCVQV KATHVGAETA  840
LSQIVQLVEA AQLARAPVQK LADQISKFFV PTVVIAAFLT WLGWFIPGEF GLYPKHWIPK  900
GMDKFELALQ FGISVLVVAC PCALGLATPT AVMVATGKGA SQGVLIKGGN SLEKAHKVKT  960
VVFDKTGTLT VGKPEVVSAV LFSNYSMEEF CAVATAAEAN SEHPIAKSIV EHATRLLTKF  1020
GSTEHVMEAK DFEVRPEVEE YVSENEKLAR TCVLVAIDGK VAGSFAVTDP VKPEAARVIS  1080
YLHSMSISSI MVTGDNWATA AAIAKEVGID KVYAETDPLG KADRIKELQL KGLTVAMVGD  1140
GINDSPALVA ADVGMAIGAG TDVAIEAADI VLMKSNLEDV VTAIHLSRKT MSRIRLNYVW  1200
ALGYNILGMP IAAGVLFPFT GIRLPPWLAG ACMAASSLSV VCSSLLLQSY KKPLHISAKS  1260
A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	4e-55	NF-YB family protein