PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g127270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 294aa    MW: 33281.3 Da    PI: 9.3681
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g127270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.21.1e-1615102197
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkvl     + ++ l+lp  f+e+ +g++  + +  l+ ++g+ W+v+l  + + +++++ +GW++Fv+++ L+ g f+vF +dg+s+f   
  Pd.00g127270.m01  15 FFKVL--LGDFYQH-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFVRDHCLEIGNFLVFDFDGDSKF--D 98 
                       66666..6666666.9**********8873.44.89**************..**********************************9999..6 PP

                       EEEE CS
                B3  94 vkvf 97 
                       v+++
  Pd.00g127270.m01  99 VTIY 102
                       6665 PP
2B351.81.5e-161952721696
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++pk+ a + g++  ++kt++l+d+ grsW v+l++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s   + +++
  Pd.00g127270.m01 195 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVELRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 272
                       68******999999..6779***************985555156*************************876433..35555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MARKLSKPSL KKQSFFKVLL GDFYQHLRLP PVFIEKLDGQ SLPKCALRGP NGKLWTVELE  60
ERENGFFFHD GWQGFVRDHC LEIGNFLVFD FDGDSKFDVT IYEPTGCEKD VEAAKRRNGN  120
PVSSVKDEIV DIETENYNKE SKSKTINAER TSRKYVMSGK RPANDCVEET STGSILFKSE  180
NSCFIKILTK TLYPVTIPKE LAIAEGLVRK KTVKLQDPAG RSWIVELRVH RSPYQRFDMT  240
KGWAKCCRAN QISQGDTIVF EFVKPSVMQI HIYRGGRVGG SGCSVVLVNP GLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-27B3 family protein