PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1266150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 227aa MW: 25728.2 Da PI: 4.4093 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.8 | 3.9e-11 | 3 | 34 | 13 | 46 |
HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ +q+G++ W++Ia +++ gRt++++k++w + Pd.00g1266150.m01 3 IQLQAQFGNK-WAKIATYLP-GRTDNDVKNFWST 34 78999*****.*********.***********65 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MVIQLQAQFG NKWAKIATYL PGRTDNDVKN FWSTRRKRFE RILQKSTSLN NRGKSPLVRH 60 ELPEIKVPPD PCSSAIEEGT SCCNYETHNC FSNSQEFRMV PLPDLVKPIL QNVEAEQPIL 120 EATPLNMISL IDSPPHYSLS QLPQPQLDLP FLSECKELDQ DPMAPDPLDM FGQEVAECES 180 GQKFFRENAA SIKLGEVKDL SIPNIVFDDF PPEMLDYLET LTSSSEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60460.1 | 2e-19 | MYB family protein |