PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1263500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 170aa MW: 19791.4 Da PI: 5.7874

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1263500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2.1e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+++ + +G+++Wk +a + g++R++k+c++rw +yl Pd.00g1263500.m01 15 RGSWTAEEDQKLAQVLEIHGPKRWKFVATKAGLNRCGKSCRLRWMNYL 62 89********************************************97 PP
2	Myb_DNA-binding	23.2	1.6e-07	68	98	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg+ + +E++l+++++++lG++ W++Ia +++ Pd.00g1263500.m01 68 RGNISDQEEDLILRLHRLLGNR-WSLIAGRLP 98 78999***************.****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MIPLSRRSTR KEVNRGSWTA EEDQKLAQVL EIHGPKRWKF VATKAGLNRC GKSCRLRWMN 60 YLRPNIKRGN ISDQEEDLIL RLHRLLGNRW SLIAGRLPEQ ESSDTENIQV MEVNALTIGR 120 EDASKCEESF KSGFNGDEFF DCSSDEGPLN LEWMNKFLEM DESWFTLHDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	1e-39	MYB family protein