PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1255820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 692aa MW: 79860.6 Da PI: 6.0976

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1255820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.6	2.3e-24	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke +w+v+++++ HnHel Pd.00g1255820.m01 71 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVMQWYVSQFSNVHNHEL 161 69******************8888.**************************************998766779***********9 PP FAR1 90 a 90 Pd.00g1255820.m01 162 L 162 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MAMKPSNNIW IRRQQCPCGD WKCYIQYEGD DLGSVSSQHV KSETTPSSSS SEAVFTPYVG 60 QIFKTDDDAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH 120 PRERKSVRCG CDAKLYLTKE IVDGVMQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEVD 180 QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLNEK 240 RENDMLELLE ACKAMTGRDP DFVYDYTIDE NEKVENIAWS FGDSIRAYTI FGDVVAFDTS 300 YRSVTYGLLL GVWFGIDNHG KAIFLGCVLL QDESSHSFAW ALQAFMRFMR GRHPQTILTD 360 IDSGLRDTIA TELPNTKHVL CIWHILSKIS SWFSLPLGSQ YENFKTEFDM LSQLESVEDF 420 EHQWNILVAR FGLVSDKHIA LLYSYRASWT FSYIRSYFLA RTLTAEFSLS LESFLKRILN 480 GQTCLQVFFE QVCIAANLEN QTREGMQYMH VKTGMPLEEH ARNILTPYAF NVLQHEIVLS 540 VQYATTEMAN GSYLVRHYKK LDGECLVIWM PDDEQIHCSC KEFEHSGILC RHSLRVLVVK 600 NYFQLPEKYF LLRWRVESSL VSVDDQNAQI SSDDCAQAFQ SLTASLLTES LISKDRFNYV 660 HNELTSLLEH VRNMPVIDEY AANAAANNIS ES

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MAMKPSNNIW IRRQQCPCGD WKCYIQYEGD DLGSVSSQHV KSETTPSSSS SEAVFTPYVG  60
QIFKTDDDAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH  120
PRERKSVRCG CDAKLYLTKE IVDGVMQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEVD  180
QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLNEK  240
RENDMLELLE ACKAMTGRDP DFVYDYTIDE NEKVENIAWS FGDSIRAYTI FGDVVAFDTS  300
YRSVTYGLLL GVWFGIDNHG KAIFLGCVLL QDESSHSFAW ALQAFMRFMR GRHPQTILTD  360
IDSGLRDTIA TELPNTKHVL CIWHILSKIS SWFSLPLGSQ YENFKTEFDM LSQLESVEDF  420
EHQWNILVAR FGLVSDKHIA LLYSYRASWT FSYIRSYFLA RTLTAEFSLS LESFLKRILN  480
GQTCLQVFFE QVCIAANLEN QTREGMQYMH VKTGMPLEEH ARNILTPYAF NVLQHEIVLS  540
VQYATTEMAN GSYLVRHYKK LDGECLVIWM PDDEQIHCSC KEFEHSGILC RHSLRVLVVK  600
NYFQLPEKYF LLRWRVESSL VSVDDQNAQI SSDDCAQAFQ SLTASLLTES LISKDRFNYV  660
HNELTSLLEH VRNMPVIDEY AANAAANNIS ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein