PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1247370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 225aa MW: 25616.3 Da PI: 10.0313

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1247370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.9e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W++ ++ g++R++k+c++rw +yl Pd.00g1247370.m01 13 KGAWSKQEDQKLIDYIQKHGEGCWNSLPKAAGLRRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	51	3.3e-16	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g1247370.m01 66 RGSFGEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MRKPCCEKTE ITKGAWSKQE DQKLIDYIQK HGEGCWNSLP KAAGLRRCGK SCRLRWINYL 60 RPDLKRGSFG EDEEDLIIRL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IRKKLVKMGT 120 TTSSSTALDQ KKPHHRDNKV PPLMQPDARN PILFRPPATT TDQKRAPNRN DEVDVSDSMS 180 INGGNQLQTG VIMSNKSFCL PDLNLDLTLS LQLAVGERQQ SDIWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-70	MYB family protein