PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1246320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 312aa    MW: 34409.9 Da    PI: 9.4718
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1246320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.73.2e-18178211134
               GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                        Cs C+t +TplWR+gp g+k+LCnaCG+++rk +
  Pd.00g1246320.m01 178 CSDCHTNSTPLWRSGPLGPKSLCNACGIRQRKAR 211
                        *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMTPVYLNPA SSPFSMVEQA EDQRLKLFIS PPYDEAASCT SFPFPTFFDS LQDQTPGTTF  60
TSLAHHQSQL YHHKDKNIWD CGTSYDQASS SSSLVQAHVV DAISNKDRRL SRCVKRMSSQ  120
MRLMQKMTSN NPDLPPGTTD HLPAEISEHK FQIHAQPREI SETSFSSNSN NTAAVRVCSD  180
CHTNSTPLWR SGPLGPKSLC NACGIRQRKA RRAMAEAAAA AANGFAVGSA DTSSPKGKVA  240
KEKKSRGSHK NKITKLIITD NNASISHYNK KNKNNKKICF KALDFQRVFP QDVAEAAMLL  300
MELSCGLINN HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-14GATA family protein