PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1243140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 758aa MW: 82384.8 Da PI: 8.9872

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1243140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	70	3e-22	426	471	1	46
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46 d epgrCrRtDGKkWRC ++v++++k+C+ H+hrgr+rsrk++e+s Pd.00g1243140.m01 426 DHEPGRCRRTDGKKWRCNKNVVPDQKYCQQHMHRGRQRSRKPVENS 471 679***************************************9985 PP
2	WRC	63	4.5e-20	638	679	2	43
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrksk 43 epgrCrRtDGKkWRC+r+vl+ +k+C H+hrg +r+ k + Pd.00g1243140.m01 638 LEPGRCRRTDGKKWRCRRDVLPHQKYCGQHIHRGAKRQMKDF 679 59************************************9976 PP
3	QLQ	54.7	3.1e-19	361	395	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +Ta+Ql++L++Q+l+yK++aan+PvP +L+++++k Pd.00g1243140.m01 361 LTATQLHELEQQALIYKHFAANLPVPFHLVLPVWK 395 7********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MYYFPCSGVS GNINSGKTSF AQQMQMSLPC VKQTDVITCK VAVAWGAGKP LVIEEVNVNP 60 PQAMEMRIKV VCTSLCRSDI TAWESQDFGM SISKTEVNLR RLLAAAPQQQ NQSKLVHYVA 120 TLREQVEQLA EERTPEGLPR VSKAVLSDYS EKIEAIASKL AAPLPDIQAP KEPLARISVK 180 ANSSDTGDNQ IPPSPGLRRR FGLTSNSEDG TREILSVDSS APVKLDAAAQ AHIEKHRKLQ 240 EDLTDEMVGL ARQLKESSLM MNHSLQDTEK ILDSTEKAVE SSLASTGHAN TRATNIYSTT 300 SKTTCFTWLQ QFDLLVMTME EEGGGKVKLG LGIGVDCYGD DHNGTEEVVG KKKKKYGGGG 360 LTATQLHELE QQALIYKHFA ANLPVPFHLV LPVWKSVAAS FGSSNAAAIN RQYPSWFSAT 420 GFDYRDHEPG RCRRTDGKKW RCNKNVVPDQ KYCQQHMHRG RQRSRKPVEN SEVASPSSTK 480 TPKNSEGELG NSKTNLQIST PKGLQLMAQS YNYVSVSQGT TMASSGYHEC KKNIRPVTTT 540 SIANIPANRS ASTNPAAVAT TTIAGPTTAT NSSTNENSLN IGVKYNSSNH ADGNCMIRGS 600 SMNVVNVSPG LGFSPKSVLQ ALLGCNGLYF DNGSGVELEP GRCRRTDGKK WRCRRDVLPH 660 QKYCGQHIHR GAKRQMKDFQ PVAVPSSSAA AMNTARLSQA TAICRKTNCA IPNTNLSISI 720 PANPPLGRND ERSNSSRDSD TTLTDTSLTA CDSSYVSS

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MYYFPCSGVS GNINSGKTSF AQQMQMSLPC VKQTDVITCK VAVAWGAGKP LVIEEVNVNP  60
PQAMEMRIKV VCTSLCRSDI TAWESQDFGM SISKTEVNLR RLLAAAPQQQ NQSKLVHYVA  120
TLREQVEQLA EERTPEGLPR VSKAVLSDYS EKIEAIASKL AAPLPDIQAP KEPLARISVK  180
ANSSDTGDNQ IPPSPGLRRR FGLTSNSEDG TREILSVDSS APVKLDAAAQ AHIEKHRKLQ  240
EDLTDEMVGL ARQLKESSLM MNHSLQDTEK ILDSTEKAVE SSLASTGHAN TRATNIYSTT  300
SKTTCFTWLQ QFDLLVMTME EEGGGKVKLG LGIGVDCYGD DHNGTEEVVG KKKKKYGGGG  360
LTATQLHELE QQALIYKHFA ANLPVPFHLV LPVWKSVAAS FGSSNAAAIN RQYPSWFSAT  420
GFDYRDHEPG RCRRTDGKKW RCNKNVVPDQ KYCQQHMHRG RQRSRKPVEN SEVASPSSTK  480
TPKNSEGELG NSKTNLQIST PKGLQLMAQS YNYVSVSQGT TMASSGYHEC KKNIRPVTTT  540
SIANIPANRS ASTNPAAVAT TTIAGPTTAT NSSTNENSLN IGVKYNSSNH ADGNCMIRGS  600
SMNVVNVSPG LGFSPKSVLQ ALLGCNGLYF DNGSGVELEP GRCRRTDGKK WRCRRDVLPH  660
QKYCGQHIHR GAKRQMKDFQ PVAVPSSSAA AMNTARLSQA TAICRKTNCA IPNTNLSISI  720
PANPPLGRND ERSNSSRDSD TTLTDTSLTA CDSSYVSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	5e-29	GRF family protein