PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1241640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 413aa MW: 46233.4 Da PI: 4.7805

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1241640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	94	139	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l+ +++ lG++ W++Ia+ ++ gRt++++k+ w+++l Pd.00g1241640.m01 94 RGPFTKDEEKLIMQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 139 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MSTYSSMDGV LYCKPHFEQL FKESGNFSKN FQPKSAEKQN EQLGSQQTLL HVLWNPRQVC 60 NLLKDSLSTG EGLLRCGKSC RLRWTNYLRP DIKRGPFTKD EEKLIMQLHG ILGNRWAAIA 120 SQLPGRTDNE IKNLWNTHLK KRLLLMGIDP QTHKPVDSNC LTSTAPASLA TRHMAQWESA 180 RLEAEARLSR ESSLFGQPPE KSEPDYFLRL WNSEVGEAFR NLTTVDKSAC PSPISQASSS 240 TKCGSVSAVT TDVGNTLTGS STMAGDQNED MEDKICQTNT EDVGHNICQS NTEDVGHNIC 300 QSNTEDVGYK ICQTNAEDLE YKSCQTNTED MGYKIFQSNT EDVEYKPWRL NTKDVMAGSD 360 SSCSNDLEDS SDTALQLLLN FPINNDMSFL EDNVDDYATT PARWTPNSFI CPL

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MSTYSSMDGV LYCKPHFEQL FKESGNFSKN FQPKSAEKQN EQLGSQQTLL HVLWNPRQVC  60
NLLKDSLSTG EGLLRCGKSC RLRWTNYLRP DIKRGPFTKD EEKLIMQLHG ILGNRWAAIA  120
SQLPGRTDNE IKNLWNTHLK KRLLLMGIDP QTHKPVDSNC LTSTAPASLA TRHMAQWESA  180
RLEAEARLSR ESSLFGQPPE KSEPDYFLRL WNSEVGEAFR NLTTVDKSAC PSPISQASSS  240
TKCGSVSAVT TDVGNTLTGS STMAGDQNED MEDKICQTNT EDVGHNICQS NTEDVGHNIC  300
QSNTEDVGYK ICQTNAEDLE YKSCQTNTED MGYKIFQSNT EDVEYKPWRL NTKDVMAGSD  360
SSCSNDLEDS SDTALQLLLN FPINNDMSFL EDNVDDYATT PARWTPNSFI CPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	7e-86	MYB family protein