PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1230760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 328aa MW: 35487.7 Da PI: 6.2868 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 122.7 | 4e-38 | 28 | 114 | 2 | 88 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++ +as+ a+ss+s+++ ss + Pd.00g1230760.m01 28 APKRSSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTVPASALaAAGSSVSEQG-SSVS 114 789*************************************************************9999988844444444433.3333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MAENKPAQIK DLQILKANKD DENKKHLAPK RSSNKDRHKK VDGRGRRIRM PALCAARVFQ 60 LTRELGHKSD GETIQWLLQQ AEPSIIAATG SGTVPASALA AAGSSVSEQG SSVSSVSSGL 120 HTRMEGLIRP SVGSEGSANW AFHMGRSNVA SGVWPLPFLS GVRSGFDQNS GQATVNFGSE 180 NLNIMQHKFG FHGFDVPGMN LGSMGFPTIL SGSNQQVPGL ELGLSQDGHI GVVSSQALTQ 240 FHQHKGQRPE EKIKIAQILA FAGLPFFQYF SFDQDEHPPE SRTYEDVQVE LPLEIWSDVS 300 RFAQPPPGPV ELDELLCDAS SCDEDAST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 6e-59 | TCP family protein |