PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1223510.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 483aa MW: 54286 Da PI: 8.3789

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1223510.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	308	354	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g1223510.m02 308 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 354 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FRVNSDLASK RNNKVTNNHQ PKFGFNKKVT RREAEEALFD EDMVDLEMRL VDDGDATGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK DARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNR VSQQKGGREG NVLAPLLENG 240 IFSGSQKKLT RQAAGTKEAA RFNIGGSSPE SLSGSVGNFT CQNTENTRSK KRRRSSNNGA 300 SRESSLLNHV EAERQRREKL NHRFYLLRSV VPNVSKMDRS SLLADAVAYI NQLKAKVEEL 360 ELKTQAQPQN PKRVSVNNLD NQCSQSTSSI VDHHSSYNNT KVVPVEVDVK IMGSEAIIRV 420 QCPDQDYPYA RLMNALKGLG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRIGIIKR 480 WHN

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD  60
FRVNSDLASK RNNKVTNNHQ PKFGFNKKVT RREAEEALFD EDMVDLEMRL VDDGDATGSE  120
WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK DARMHGIQTL  180
VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNR VSQQKGGREG NVLAPLLENG  240
IFSGSQKKLT RQAAGTKEAA RFNIGGSSPE SLSGSVGNFT CQNTENTRSK KRRRSSNNGA  300
SRESSLLNHV EAERQRREKL NHRFYLLRSV VPNVSKMDRS SLLADAVAYI NQLKAKVEEL  360
ELKTQAQPQN PKRVSVNNLD NQCSQSTSSI VDHHSSYNNT KVVPVEVDVK IMGSEAIIRV  420
QCPDQDYPYA RLMNALKGLG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRIGIIKR  480
WHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	4e-59	bHLH family protein