PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1222950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 529aa    MW: 58576.8 Da    PI: 6.2032
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1222950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.21.4e-1131575281374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPi 90 
                        lv+lL++cAeav+ +d++ a+alL++l+ +a   g+++qR+a++f+++La+rla  ++  +  +  +p ++++   +++  al+l +e++P 
  Pd.00g1222950.m01 157 LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLANRLALVQPLGAVGFigSPMNAKDFALDKKEEALRLVYEICPH 248
                        689**************************************************9955544434413444444444999999*********** PP

               GRAS  91 lkfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                        ++f+h++aN+ Ilea+ege+ vH++D++++    +G QW  L+++La+R+++pp +lRiTgvg       ++l+ +g+ L+ +A++lg+++e
  Pd.00g1222950.m01 249 IQFGHFVANSSILEAFEGESYVHVVDLGMTlglpHGDQWRGLIESLATRAGQPPsRLRITGVGL----YGDRLQIIGDELEAYADRLGINLE 336
                        **************************99873333667*************888879********....9*********************** PP

               GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                        f+v v+++le+l++e++++  gE+l+Vn++lqlh +++es    +   +vL++v +lsPk++v+veq+++hn++ Fl rf+eal+yysa+fd
  Pd.00g1222950.m01 337 FSV-VESNLENLRPEDIKLLDGEVLVVNSILQLHCVVKESRGALN---SVLQMVHELSPKILVLVEQDSSHNGPFFLGRFMEALHYYSAIFD 424
                        **9.7********************************88877777...8******************************************* PP

               GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360
                        sl+a lp+ +  r+k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF+++p++  +  +ak  l k+k  +gy++ ee+g+lvl
  Pd.00g1222950.m01 425 SLDAMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MLVNAKQWLGKIKvCEGYTILEEKGCLVL 514
                        ***********************************************************97..5678999******99************** PP

               GRAS 361 gWkdrpLvsvSaWr 374
                        gWk++p+v++S+W+
  Pd.00g1222950.m01 515 GWKSKPIVAASCWK 528
                        *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MAPSPNFMPE EYMVNHERTN KMSAFDLISH SAMSCYSNPY MPLLEEGNAS ALTLPYSDES  60
GDHKRLKRTI SIAESMSSHN SLYSGGSNNS CVTNGSISRS SSTNSLNTLP RLHFRDHIWT  120
YSQRYLAAEA VEEAAAAMTN AEGNGAEEDG TADGMRLVQL LIACAEAVAC RDKSHASALL  180
SELRANALVF GSSFQRVASC FVQGLANRLA LVQPLGAVGF IGSPMNAKDF ALDKKEEALR  240
LVYEICPHIQ FGHFVANSSI LEAFEGESYV HVVDLGMTLG LPHGDQWRGL IESLATRAGQ  300
PPSRLRITGV GLYGDRLQII GDELEAYADR LGINLEFSVV ESNLENLRPE DIKLLDGEVL  360
VVNSILQLHC VVKESRGALN SVLQMVHELS PKILVLVEQD SSHNGPFFLG RFMEALHYYS  420
AIFDSLDAML PKYDTRRAKM EQFYFAEEIK NIISCEGPAR VERHERVDQW RRRMSRAGFQ  480
AAPIKMLVNA KQWLGKIKVC EGYTILEEKG CLVLGWKSKP IVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-80GRAS family protein