PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1216130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 372aa MW: 42153.2 Da PI: 4.6031 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 78.2 | 8.8e-25 | 284 | 334 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+ Pd.00g1216130.m01 284 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 334 789*********************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MADPRAVVPY HDPYDSGPYT EIMNLLNDSE HPRIDENNIP PLEGSLASPN PTPMFDEEIQ 60 DVDKPLMDQA MWDFIYGSDN GGEGINSQAG PSQIFTESSG TNPPRGDGNE QNHGFGNVRP 120 LSVWPLPSDP INCTFCQVFR EIVHFNSDNV MKLEIHGRLG VICHAILQSR RNANLNSSGN 180 HQYQMLDFCK TPGEEVKQFL MQYCLERKLE GYIMQQDPLT FFYEALCVGV DWDAILNPTD 240 DFDFPPSPPD SGDMEKPAEV QPEAAEHEIE TNPRISLAEQ RERTANMTLD DLRDYVHLPI 300 EKAARRLNVC PTVVKRICRR NGLRRWPSRK ITSINRKISR LRPSLGSDDA ETRVHAEAEI 360 SRLEREIAEL VP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 3e-14 | Nin-like family protein |